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    RNaseP:RNA Ribonuclease P RNA [ Drosophila melanogaster (fruit fly) ]

    Gene ID: 3772418, updated on 29-Dec-2023

    Summary

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    Official Symbol
    RNaseP:RNAprovided by FlyBase
    Official Full Name
    Ribonuclease P RNAprovided by FlyBase
    Primary source
    FLYBASE:FBgn0046696
    Locus tag
    Dmel_CR32868
    See related
    AllianceGenome:FB:FBgn0046696
    Gene type
    ncRNA
    Organism
    Drosophila melanogaster
    Lineage
    Eukaryota; Metazoa; Ecdysozoa; Arthropoda; Hexapoda; Insecta; Pterygota; Neoptera; Endopterygota; Diptera; Brachycera; Muscomorpha; Ephydroidea; Drosophilidae; Drosophila; Sophophora
    Also known as
    chr3R:27043287..27043402; CR32868; Dm RPR; Dmel\CR32868; P RNA; RNase P RNA; RNAseP; RPR; RPR RNA
    Summary
    Enables ribonuclease MRP activity. Involved in tRNA 5'-end processing. Part of ribonuclease MRP complex. [provided by Alliance of Genome Resources, Apr 2022]
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    Genomic context

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    Location:
    100B7-100B7; 3-102 cM
    Exon count:
    1
    Annotation release Status Assembly Chr Location
    Release 6.54 current Release 6 plus ISO1 MT (GCF_000001215.4) 3R NT_033777.3 (31217364..31217662, complement)
    Release 5.57 previous assembly Release 5 (GCF_000001215.2) 3R NT_033777.2 (27043086..27043384, complement)

    Chromosome 3R - NT_033777.3Genomic Context describing neighboring genes Neighboring gene zwilch Neighboring gene uncharacterized protein Neighboring gene uncharacterized protein Neighboring gene ATP synthase, subunit C Neighboring gene mir-4949 stem loop Neighboring gene uncharacterized protein

    Genomic regions, transcripts, and products

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    Go to nucleotide: Graphics FASTA GenBank

    Bibliography

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    Related articles in PubMed

    1. Identification and analysis of ribonuclease P and MRP RNA in a broad range of eukaryotes. Piccinelli P, et al. Nucleic Acids Res, 2005. PMID 16087735, Free PMC Article
    2. Transcriptional control of an essential ribozyme in Drosophila reveals an ancient evolutionary divide in animals. Manivannan SN, et al. PLoS Genet, 2015 Jan. PMID 25569672, Free PMC Article
    3. Vicinal: a method for the determination of ncRNA ends using chimeric reads from RNA-seq experiments. Lu Z, et al. Nucleic Acids Res, 2014 May. PMID 24623808, Free PMC Article
    4. Biogenesis of RNase P RNA from an intron requires co-assembly with cognate protein subunits. Palsule G, et al. Nucleic Acids Res, 2019 Sep 19. PMID 31287870, Free PMC Article
    5. The nuclear OXPHOS genes in insecta: a common evolutionary origin, a common cis-regulatory motif, a common destiny for gene duplicates. Porcelli D, et al. BMC Evol Biol, 2007 Nov 8. PMID 18315839, Free PMC Article

    See all (12) citations in PubMed

    GeneRIFs: Gene References Into Functions

    General gene information

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    • RNaseP:RNA-RA; Dmel\RNaseP:RNA-RA; CR32868-RA; Dmel\CR32868-RA
    • RNaseP:RNA-RB; Dmel\RNaseP:RNA-RB; CR32868-RB; Dmel\CR32868-RB
    • alternate names: RNase P RNA

    Gene Ontology Provided by FlyBase

    Function Evidence Code Pubs
    enables ribonuclease P activity IDA
    Inferred from Direct Assay
    more info
    		 PubMed 
    enables ribonuclease P activity IEA
    Inferred from Electronic Annotation
    more info
    		  
    Process Evidence Code Pubs
    involved_in tRNA 5'-end processing IDA
    Inferred from Direct Assay
    more info
    		 PubMed 
    involved_in tRNA processing IEA
    Inferred from Electronic Annotation
    more info
    		  
    Component Evidence Code Pubs
    part_of ribonuclease P complex IDA
    Inferred from Direct Assay
    more info
    		 PubMed 
    part_of ribonuclease P complex IEA
    Inferred from Electronic Annotation
    more info
    		  

    NCBI Reference Sequences (RefSeq)

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    Genome Annotation

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference assembly

    Genomic

    1. NT_033777.3 Reference assembly

      Range
      31217364..31217662 complement
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    RNA

    1. NR_002092.1 RNA Sequence

      Status: REVIEWED

    2. NR_133496.1 RNA Sequence

      Status: REVIEWED

    Nucleotide Protein
    Heading Accession and Version

    Gene LinkOut

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    Molecular Biology Databases